Publications


Willett FR,…, Chen Y, Zheng X, Okubo TS,…, Henderson (arXiv, 2024)

Brain-to-Text Benchmark '24: Lessons Learned


Chen P*, Yang H*, Zheng X, Jia H, Hao J, Xu X, Li C, He X, Chen R, Okubo TS#, Cui Z# (Imaging Neuroscience, 2024)

Group-common and individual-specific effects of structure–function coupling in human brain networks with graph neural networks


Schlegel P,..., The FlyWire Consortium,..., Bock DD, Jefferis GSXE (Nature, 2024)

Whole-brain annotation and multi-connectome cell typing of Drosophila


Dorkenwald S,..., Seung HS, Murthy M, The FlyWire Consortium (Nature, 2024)

Neuronal wiring diagram of an adult brain


Mukai Y, Okubo TS, Lazarus M, Ono D, Tanaka KF, Yamanaka A (J Neurosci, 2023)

Prostaglandin E2 induces long-lasting inhibition of noradrenergic neurons in the locus coeruleus and moderates the behavioral response to stressors


Okubo TS, Patella P, D'Alessandro I, Wilson RI (Neuron, 2020)

A Neural Network for Wind-Guided Compass Navigation

Dispatch by Basil el Jundi and Marie DackeHarvard Brain Initiative newsNew Scientist


Lynch GF*, Okubo TS*, Hanuschkin A, Hahnloser RHR, Fee MS (Neuron, 2016)*equal contributions

Rhythmic Continuous-Time Coding in the Songbird Analog of Vocal Motor Cortex

Preview by Todd Troyer


Okubo TS, Mackevicius EL, Payne HL, Lynch GF, Fee MS (Nature, 2015)

Growth and splitting of neural sequences in songbird vocal development

MIT newsSimons foundation news


Okubo TS, Mackevicius EL, Fee MS (Cold Spring Harb Protoc, 2014)

In vivo recording of single-unit activity during singing in zebra finches



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